Draft Genome Sequence of Paenibacillus polymyxa 3A-25AI, a Strain Antagonist to Root Rot Causal Phytopathogens.
Identifieur interne : 000235 ( Main/Exploration ); précédent : 000234; suivant : 000236Draft Genome Sequence of Paenibacillus polymyxa 3A-25AI, a Strain Antagonist to Root Rot Causal Phytopathogens.
Auteurs : Jazmín L Pez-Martínez [Mexique] ; Yumiko De La Cruz-Rodríguez [Mexique] ; Alejandro Alvarado-Gutiérrez [Mexique] ; Miguel Alvarado-Rodríguez [Mexique] ; Julio Vega-Arreguín [Mexique] ; Saúl Fraire-Velázquez [Mexique]Source :
- Microbiology resource announcements [ 2576-098X ] ; 2020.
Abstract
Here, we report the draft genome sequence of the Paenibacillus polymyxa 3A-25AI strain, isolated from the rhizosphere of wild grass. This strain inhibits Phytophthora capsici and Rhizoctonia solani phytopathogens. The genome size is 5.6 Mb, with a G+C content of 45.59%, and contains 5,079 genes, 4,968 coding DNA sequences (CDSs), 35 tRNAs, 3 rRNAs, and 72 unexpected miscellaneous RNA (miscRNA) features.
DOI: 10.1128/MRA.01464-19
PubMed: 32054710
PubMed Central: PMC7019065
Affiliations:
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last="L Pez-Martínez">Jazmín L Pez-Martínez</name><affiliation wicri:level="1"><nlm:affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico.</nlm:affiliation><country xml:lang="fr">Mexique</country><wicri:regionArea>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas</wicri:regionArea><wicri:noRegion>Zacatecas</wicri:noRegion></affiliation></author><author><name sortKey="De La Cruz Rodriguez, Yumiko" sort="De La Cruz Rodriguez, Yumiko" uniqKey="De La Cruz Rodriguez Y" first="Yumiko" last="De La Cruz-Rodríguez">Yumiko De La Cruz-Rodríguez</name><affiliation wicri:level="1"><nlm:affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico.</nlm:affiliation><country 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Guanajuato</wicri:regionArea><wicri:noRegion>Guanajuato</wicri:noRegion></affiliation></author><author><name sortKey="Fraire Velazquez, Saul" sort="Fraire Velazquez, Saul" uniqKey="Fraire Velazquez S" first="Saúl" last="Fraire-Velázquez">Saúl Fraire-Velázquez</name><affiliation wicri:level="1"><nlm:affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico sfraire@uaz.edu.mx.</nlm:affiliation><country wicri:rule="url">Mexique</country><wicri:regionArea>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas</wicri:regionArea><wicri:noRegion>Zacatecas</wicri:noRegion></affiliation></author></analytic><series><title level="j">Microbiology resource announcements</title><idno type="eISSN">2576-098X</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Here, we report the draft genome sequence of the <i>Paenibacillus polymyxa</i> 3A-25AI strain, isolated from the rhizosphere of wild grass. This strain inhibits <i>Phytophthora capsici</i> and <i>Rhizoctonia solani</i> phytopathogens. The genome size is 5.6 Mb, with a G+C content of 45.59%, and contains 5,079 genes, 4,968 coding DNA sequences (CDSs), 35 tRNAs, 3 rRNAs, and 72 unexpected miscellaneous RNA (miscRNA) features.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">32054710</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2576-098X</ISSN><JournalIssue CitedMedium="Internet"><Volume>9</Volume><Issue>7</Issue><PubDate><Year>2020</Year><Month>Feb</Month><Day>13</Day></PubDate></JournalIssue><Title>Microbiology resource announcements</Title><ISOAbbreviation>Microbiol Resour Announc</ISOAbbreviation></Journal><ArticleTitle>Draft Genome Sequence of Paenibacillus polymyxa 3A-25AI, a Strain Antagonist to Root Rot Causal Phytopathogens.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">e01464-19</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1128/MRA.01464-19</ELocationID><Abstract><AbstractText>Here, we report the draft genome sequence of the <i>Paenibacillus polymyxa</i> 3A-25AI strain, isolated from the rhizosphere of wild grass. This strain inhibits <i>Phytophthora capsici</i> and <i>Rhizoctonia solani</i> phytopathogens. The genome size is 5.6 Mb, with a G+C content of 45.59%, and contains 5,079 genes, 4,968 coding DNA sequences (CDSs), 35 tRNAs, 3 rRNAs, and 72 unexpected miscellaneous RNA (miscRNA) features.</AbstractText><CopyrightInformation>Copyright © 2020 López-Martínez et al.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>López-Martínez</LastName><ForeName>Jazmín</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>De La Cruz-Rodríguez</LastName><ForeName>Yumiko</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Alvarado-Gutiérrez</LastName><ForeName>Alejandro</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Alvarado-Rodríguez</LastName><ForeName>Miguel</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Unidad Académica de Agronomía, Universidad Autónoma de Zacatecas, Zacatecas, Mexico.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vega-Arreguín</LastName><ForeName>Julio</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>ENES-León, Universidad Nacional Autónoma de México, León, Guanajuato, Mexico.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fraire-Velázquez</LastName><ForeName>Saúl</ForeName><Initials>S</Initials><Identifier Source="ORCID">https://orcid.org/0000-0003-2949-1678</Identifier><AffiliationInfo><Affiliation>Biología Integrativa de Plantas y Microorganismos, Unidad Académica de Ciencias Biológicas, Universidad Autónoma de Zacatecas, Zacatecas, Mexico sfraire@uaz.edu.mx.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>02</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>Microbiol Resour Announc</MedlineTA><NlmUniqueID>101728794</NlmUniqueID><ISSNLinking>2576-098X</ISSNLinking></MedlineJournalInfo></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>2</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate 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IdType="pubmed">25977477</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Mexique</li></country></list><tree><country name="Mexique"><noRegion><name sortKey="L Pez Martinez, Jazmin" sort="L Pez Martinez, Jazmin" uniqKey="L Pez Martinez J" first="Jazmín" last="L Pez-Martínez">Jazmín L Pez-Martínez</name></noRegion><name sortKey="Alvarado Gutierrez, Alejandro" sort="Alvarado Gutierrez, Alejandro" uniqKey="Alvarado Gutierrez A" first="Alejandro" last="Alvarado-Gutiérrez">Alejandro Alvarado-Gutiérrez</name><name sortKey="Alvarado Rodriguez, Miguel" sort="Alvarado Rodriguez, Miguel" uniqKey="Alvarado Rodriguez M" first="Miguel" last="Alvarado-Rodríguez">Miguel Alvarado-Rodríguez</name><name sortKey="De La Cruz Rodriguez, Yumiko" sort="De La Cruz Rodriguez, Yumiko" uniqKey="De La Cruz Rodriguez Y" first="Yumiko" last="De La Cruz-Rodríguez">Yumiko De La Cruz-Rodríguez</name><name sortKey="Fraire Velazquez, Saul" sort="Fraire Velazquez, Saul" uniqKey="Fraire Velazquez S" first="Saúl" last="Fraire-Velázquez">Saúl Fraire-Velázquez</name><name sortKey="Vega Arreguin, Julio" sort="Vega Arreguin, Julio" uniqKey="Vega Arreguin J" first="Julio" last="Vega-Arreguín">Julio Vega-Arreguín</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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